Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918060.1_cds_XP_016467589.1_60321
CDS Infomation

[gene=LOC107790198] [db_xref=GeneID:107790198] [protein=probable protein phosphatase 2C 4] [protein_id=XP_016467589.1] [location=join(37302..38966,39092..39205,39954..40218,40323..40438)] [gbkey=CDS]
Sequence

ATGGGTAACGGTGTAGGAAAGCTCAGCGTCTGCTTCACCAGCGGCGGCGGCGGCTGCGCC
GTCGAGTCCCGTCGCCGGAAGGATTTCCCCTTAATGATTTCCGACCCACTTGAAGACCTG
GGTCACTCCTTCTGCTACGTCAGGCCCGACCCGACCCGAATTTCGTCCTCCAAGGTTCAC
TCCGAGGAGACCACCACTTTCCGGTCAATCTCCGGCGCCTCCGTCAGTGCCAACACCTCC
ACGCCGCTGTCCACGGCGTTCGTCGATCTGTATTCTTACAACAGCATCGATAGGTCTTCG
GCCTTTGAGGGGTCCACCTCCTTTGCTTCAATACCTCTTCAGCCAATTCCGAGAAACTCC
TCTATCCACTCCGGCCCGCTTTCGACTTCGGGGCTTATTTCAGGTCCCGGCCCGGTTGAA
CGTGGCTTCATGTCCGGCCCGATTGAGAGGGGATTTCAATCGGGCCCCCTCGATCGTGGT
CTTTATTCGGGCCCTCTTGAAAGAAGCTATTGTCCTGATCAGTTCCAAAGAAGTTATTCA
CATGGTTTTGCTCTTCGATCCAGAGCAAGAAAAGGGTCTTTTATCCGGGTCCTCCAAAGA
GCTATTTCAAAGACCTTATCAAGAGGTCAAAATTCAGTTGTTGCACCGATTAAAGGGTCA
ATTTCAGTGAAAGAAAGTGATTGGATAGTGGGTTCTGAGAAGCAGAACGAATTGACAATC
AGCAGTGTGAACTTCAGCAGTGAGTGCAGCTTGGATGATGATGACTCGTTAGAAAATCAG
AATCTTCAGTGGGCTCAAGGGAAAGCTGGTGAAGATCGTGTTCATGTTGTAGTTTCTGAG
GAACATGGTTGGGTTTTTGTTGGGATTTATGATGGATTTAATGGTCCTGACGCACCTGAT
TTTTTAGTAACTAATTTGTACCCAGCTGTTCACAAAGAACTCAAGGGATTGTTGTGGGAT
GACAAGTCAGATTCATCTAATACTGATAATAGTACAATCCCAGCTTCGAGTATGGAAGTG
AAAGAGGAATCAAATCAGATTTGTGATGATGATTTTACAAGGGATAGGACTAAAGATGGT
TGTTCAAGATGCGTTGAACAAGAGAATTATCCTTCAGCAAGAGAGGATCTTTATTTCGAT
TCGCGGTTAAAGAAAAAGAGGGGGAAGGTTTCAAAGAGTAAGTACAGAGGATTAGCAAAG
AAATGGGAAGAAAATCAGAGGAGGTGGCGGTGTGAATGGGATAGGGAAAGATTAGAACTT
GATAGGAGATTGAAGGAGCAGCTGAATGGAAATGGTTCTAATGGATCAGGATCAGTTAAT
CATGAAGATGTTTTGAAAGCTCTTTCTCAAGCACTGAAGAAAACAGAAGAGGCATATTTG
GATCTAGCTGATAGGATGGTTATGGAAAATCCTGAGTTAGCTTTGATGGGTTCTTGTGTT
CTTGTTATGTTAATGAAGGGGGAGGATGTTTATGTGATGAATGTAGGCGATAGTCGAGCT
GTGTTAGCTCAGAAGAAGGAGCCTAATCTCTGGAGCCAAGATTTGGAGCGGATCAATGAA
GAGACTTTGAATGATCTTGAGCTTTTAGATGGTGATGAGTCGAACAGTATACCTAATTTA
ACTGCTAGTCAGCTTAGTACAGATCATAGTACATCTGTGGAAGAGGAAGTTCAAAGAATA
AGAAGTGAACATCCAGATGATGCATATGCTTTGATGAATGACCGCGTGAAAGGTTCTTTG
AAGGTTACCCGGGCTTTTGGTGCTGGTTTCCTGAAACAGCCTAAATGGAACAATGCGCTT
CTGGAGATGTTCAGAATTGATTATATTGGAACTTCTCCCTACATCAGTTGTCTACCATCT
CTCCATCATCACAGATTAGGGCCGAGAGACAGGTTTTTGATACTGTCATCTGATGGGCTT
TATCAGTACTTCACAAATGAAGAAGCTGTTTTAGAAGTTGAACATTTCATCTCATGGTCA
CCTGATGGAGATCCTGCACAACATCTTATTGAGAAAGTATTGTTTCGTGCGGCCAAAAGA
GCTGGTTTGGAGTTTCACGAGTTGCTTGAAATTCCACAAGGGGATAGACGCCGGTACCAT
GATGATGTTTCAATTATTGTTATTTCGTTGGAGGGGAGAATATGGAGATCCAGTGCGTAA

Peptide Sequence

PEP ID

XP_016467589.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 4 [Nicotiana tabacum]
Sequence

MGNGVGKLSVCFTSGGGGCAVESRRRKDFPLMISDPLEDLGHSFCYVRPDPTRISSSKVH
SEETTTFRSISGASVSANTSTPLSTAFVDLYSYNSIDRSSAFEGSTSFASIPLQPIPRNS
SIHSGPLSTSGLISGPGPVERGFMSGPIERGFQSGPLDRGLYSGPLERSYCPDQFQRSYS
HGFALRSRARKGSFIRVLQRAISKTLSRGQNSVVAPIKGSISVKESDWIVGSEKQNELTI
SSVNFSSECSLDDDDSLENQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPD
FLVTNLYPAVHKELKGLLWDDKSDSSNTDNSTIPASSMEVKEESNQICDDDFTRDRTKDG
CSRCVEQENYPSAREDLYFDSRLKKKRGKVSKSKYRGLAKKWEENQRRWRCEWDRERLEL
DRRLKEQLNGNGSNGSGSVNHEDVLKALSQALKKTEEAYLDLADRMVMENPELALMGSCV
LVMLMKGEDVYVMNVGDSRAVLAQKKEPNLWSQDLERINEETLNDLELLDGDESNSIPNL
TASQLSTDHSTSVEEEVQRIRSEHPDDAYALMNDRVKGSLKVTRAFGAGFLKQPKWNNAL
LEMFRIDYIGTSPYISCLPSLHHHRLGPRDRFLILSSDGLYQYFTNEEAVLEVEHFISWS
PDGDPAQHLIEKVLFRAAKRAGLEFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSSA

Transcript Sequence

Gene sequence data has not been registered.